Elicitor-induced transcription factors for metabolic reprogramming of secondary metabolism in Medicago truncatula

<p>Abstract</p> <p>Background</p> <p>Exposure of <it>Medicago truncatula </it>cell suspension cultures to pathogen or wound signals leads to accumulation of various classes of flavonoid and/or triterpene defense molecules, orchestrated via a complex signalling network in which transcription factors (TFs) are essential components.</p> <p>Results</p> <p>In this study, we analyzed TFs responding to yeast elicitor (YE) or methyl jasmonate (MJ). From 502 differentially expressed TFs, <it>WRKY </it>and <it>AP2/EREBP </it>gene families were over-represented among YE-induced genes whereas <it>Basic Helix-Loop-Helix </it>(<it>bHLH</it>) family members were more over-represented among the MJ-induced genes. Jasmonate ZIM-domain <it>(JAZ</it>) transcriptional regulators were highly induced by MJ treatment. To investigate potential involvement of <it>WRKY </it>TFs in signalling, we expressed four <it>Medicago WRKY </it>genes in tobacco. Levels of soluble and wall bound phenolic compounds and lignin were increased in all cases. <it>WRKY W109669 </it>also induced tobacco <it>endo-1,3-β-glucanase </it>(<it>NtPR2</it>) and enhanced the systemic defense response to tobacco mosaic virus in transgenic tobacco plants.</p> <p>Conclusion</p> <p>These results confirm that <it>Medicago WRKY </it>TFs have broad roles in orchestrating metabolic responses to biotic stress, and that they also represent potentially valuable reagents for engineering metabolic changes that impact pathogen resistance.</p

Fano hypersurfaces and Calabi-Yau supermanifolds

In this paper, we study the geometrical interpretations associated with Sethi's proposed general correspondence between N = 2 Landau-Ginzburg orbifolds with integral \hat{c} and N = 2 nonlinear sigma models. We focus on the supervarieties associated with \hat{c} = 3 Gepner models. In the process, we test a conjecture regarding the superdimension of the singular locus of these supervarieties. The supervarieties are defined by a hypersurface \widetilde{W} = 0 in a weighted superprojective space and have vanishing super-first Chern class. Here, \widetilde{W} is the modified superpotential obtained by adding as necessary to the Gepner superpotential a boson mass term and/or fermion bilinears so that the superdimension of the supervariety is equal to \hat{c}. When Sethi's proposal calls for adding fermion bilinears, setting the bosonic part of \widetilde{W} (denoted by \widetilde{W}_{bos}) equal to zero defines a Fano hypersurface embedded in a weighted projective space. In this case, if the Newton polytope of \widetilde{W}_{bos} admits a nef partition, then the Landau-Ginzburg orbifold can be given a geometrical interpretation as a nonlinear sigma model on a complete intersection Calabi-Yau manifold. The complete intersection Calabi-Yau manifold should be equivalent to the Calabi-Yau supermanifold prescribed by Sethi's proposal.Comment: 24 pages, uses JHEP3.cls; v2: minor corrections, references adde

Shwartzman reaction after human renal homotransplantation.

In three human recipients, five renal homografts were destroyed within a few minutes to hours after their revascularization in the new host. The kidneys, removed one to 54 days later, had cortical necrosis. The major vessels were patent, but the arterioles and glomeruli were the site of fibrin deposition. There was little or no fixation of host immunoglobulins in the homografts. The findings were characteristic of a generalized Shwartzman reaction. Although the cause (or causes) of the Shwartzman reaction in our patients is not known, they may have been conditioned by the bacterial contamination and hemolysis that often attend hemodialysis, by immunosuppression and by the transplantation itself. Some of the patients have preformed lymphocytotoxic antibodies. Thus, certain patients may be predisposed. High-risk patients should be recognized and treated prophylactically with anticoagulants

Next-to-leading order spin-orbit and spin(a)-spin(b) Hamiltonians for n gravitating spinning compact objects

We derive the post-Newtonian next-to-leading order conservative spin-orbit and spin(a)-spin(b) gravitational interaction Hamiltonians for arbitrary many compact objects. The spin-orbit Hamiltonian completes the knowledge of Hamiltonians up to and including 2.5PN for the general relativistic three-body problem. The new Hamiltonians include highly nontrivial three-body interactions, in contrast to the leading order consisting of two-body interactions only. This may be important for the study of effects like Kozai resonances in mergers of black holes with binary black holes.Comment: 13 pages, 1 Mathematica source file, v2: submitted version, v3: published version, some minor correction

Identification of candidate genes affecting Delta9-tetrahydrocannabinol biosynthesis in Cannabis sativa.

RNA isolated from the glands of a Delta(9)-tetrahydrocannabinolic acid (THCA)-producing strain of Cannabis sativa was used to generate a cDNA library containing over 100 000 expressed sequence tags (ESTs). Sequencing of over 2000 clones from the library resulted in the identification of over 1000 unigenes. Candidate genes for almost every step in the biochemical pathways leading from primary metabolites to THCA were identified. Quantitative PCR analysis suggested that many of the pathway genes are preferentially expressed in the glands. Hexanoyl-CoA, one of the metabolites required for THCA synthesis, could be made via either de novo fatty acids synthesis or via the breakdown of existing lipids. qPCR analysis supported the de novo pathway. Many of the ESTs encode transcription factors and two putative MYB genes were identified that were preferentially expressed in glands. Given the similarity of the Cannabis MYB genes to those in other species with known functions, these Cannabis MYBs may play roles in regulating gland development and THCA synthesis. Three candidates for the polyketide synthase (PKS) gene responsible for the first committed step in the pathway to THCA were characterized in more detail. One of these was identical to a previously reported chalcone synthase (CHS) and was found to have CHS activity. All three could use malonyl-CoA and hexanoyl-CoA as substrates, including the CHS, but reaction conditions were not identified that allowed for the production of olivetolic acid (the proposed product of the PKS activity needed for THCA synthesis). One of the PKS candidates was highly and specifically expressed in glands (relative to whole leaves) and, on the basis of these expression data, it is proposed to be the most likely PKS responsible for olivetolic acid synthesis in Cannabis glands